Insights into the geographical origin and phylogeographical patterns of Paradisaea birds-of-paradise Author Stelbrink, Björn Author Von Rintelen, Thomas Author Richter, Kirsten Author Finstermeier, Knut Author Frahnert, Sylke Author Cracraft, Joel Author Hofreiter, Michael text Zoological Journal of the Linnean Society 2022 2022-12-01 196 4 1394 1407 https://academic.oup.com/zoolinnean/article/196/4/1394/6547518 journal article 10.1093/zoolinnean/zlac010 0024-4082 7381014
Table 2. Results of the molecular-clock analyses using two calibration schemes and different clock models and tree priors (N1) and subsequent splits within the genus are given in Myr (mean ages and 95% highest posterior densities in brackets likelihood values based on PS and SS and the two replicates are provided for each analysis
Substitution rateIndirect calibration
NodeSTR-BDSTR-Y UCLN-BDUCLN-Y STR-BDSTR-Y UCLN-BDUCLN-Y
N1 = MRCA Paradisaea6.1 (4.6, 7.7)5.8 (4.5, 7.3) 6.2 (4.5, 7.9)5.6 (3.7, 7.7) 6.3 (4.7, 8.0)7.5 (5.7, 9.2) 6.3 (4.5, 8.3)9.5 (5.9, 13.7)
N2 = split P. guilielmi & rest4.3 (3.2, 5.5)4.2 (3.2, 5.3) 4.3 (3.2, 5.6)4.1 (2.7, 5.8) 4.5 (3.3, 5.7)5.4 (4.1, 6.8) 4.5 (3.1, 5.9)7.0 (4.0, 10.3)
N3 = split P. decora + P. rubra & rest2.1 (1.5, 2.7)2.1 (1.6, 2.7) 2.1 (1.5, 2.7)2.5 (1.6, 3.5) 2.1 (1.5, 2.8)2.7 (2.0, 3.5) 2.1 (1.5, 2.9)4.1 (2.1, 6.8)
N4 = MRCA P. decora + P. rubra1.3 (0.8, 1.8)1.4 (0.9, 1.9) 1.3 (0.8, 1.9)1.6 (0.8, 2.5) 1.4 (0.9, 1.9)1.8 (1.1, 2.4) 1.4 (0.8, 2.0)2.7 (1.2, 4.7)
N5 = MRCA apoda – minor – raggiana clade1.2 (0.9, 1.6)1.3 (0.9, 1.6) 1.2 (0.9, 1.6)1.6 (1.0, 2.4) 1.2 (0.9, 1.6)1.6 (1.2, 2.1) 1.3 (0.8, 1.7)2.7 (1.3, 4.7)
N6 = split P. minor small clade & P. apoda + P. raggiana1.0 (0.8, 1.3)1.1 (0.8, 1.4) 1.1 (0.8, 1.4)1.4 (0.9, 2.1) 1.1 (0.8, 1.4)1.4 (1.0, 1.8) 1.1 (0.7, 1.4)2.4 (1.1, 4.2)
N7 = MRCA Clade 20.7 (0.5, 1.0)0.8 (0.5, 1.1) 0.7 (0.5, 1.0)1.0 (0.5, 1.6) 0.7 (0.5, 1.0)1.0 (0.6, 1.4) 0.8 (0.4, 1.1)1.6 (0.6, 3.0)
N8 = MRCA Clade 30.7 (0.5, 0.9)0.7 (0.5, 1.0) 0.7 (0.5, 0.9)1.0 (0.6, 1.5) 0.7 (0.5, 0.9)1.0 (0.7, 1.3) 0.7 (0.5, 1.0)1.6 (0.7, 3.0)
N9 = MRCA Clade 10.5 (0.3, 0.7)0.5 (0.4, 0.7) 0.5 (0.3, 0.7)0.8 (0.4, 1.2) 0.5 (0.3, 0.7)0.7 (0.5, 0.9) 0.5 (0.3, 0.7)1.3 (0.5, 2.4)
N10 = MRCA P. rubra0.5 (0.3, 0.8)0.5 (0.3, 0.8) 0.5 (0.3, 0.8)0.7 (0.3, 1.2) 0.5 (0.3, 0.8)0.7 (0.4, 1.0) 0.5 (0.3, 0.8)1.1 (0.3, 2.2)
N11 = MRCA P. rudolphi0.3 (0.2, 0.5)0.4 (0.2, 0.5) 0.3 (0.2, 0.5)0.5 (0.2, 0.9) 0.3 (0.2, 0.5)0.5 (0.2, 0.7) 0.3 (0.2, 0.5)0.8 (0.2, 1.7)
N12 = MRCA P. guilielmi0.3 (0.2, 0.5)0.4 (0.2, 0.5) 0.3 (0.2, 0.5)0.5 (0.2, 1.0) 0.3 (0.2, 0.5)0.4 (0.2, 0.7) 0.3 (0.2, 0.5)0.8 (0.2, 1.7)
N13 = MRCA P. decora0.1 (0.0, 0.3)0.2 (0.0, 0.3) 0.1 (0.0, 0.3)0.2 (0.0, 0.5) 0.1 (0.0, 0.3)0.2 (0.0, 0.4) 0.1 (0.0, 0.3)0.3 (0.0, 0.8)
MLE mean-9,115.8-9,168.8 -9,114.8-9,163.2 -9,132.4-9,175.1 -9,130.5-9,172.3