<document tableId="DF2423DFFFC41E64FF14FF0FB84B41FF" sourceDocId="FFCBBA39FFC71E67FFB2FFCCBD35411E" captionStart="Table 1" checkinTime="1718715962091" checkinUser="juliana" pageId="3" pageNumber="4" updateTime="1718715962091" updateUser="juliana"><mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
    <mods:titleInfo>
        <mods:title>A draft genome of a field-collected Steinernema feltiae strain NW</mods:title>
    </mods:titleInfo>
    <mods:name type="personal">
        <mods:role>
            <mods:roleTerm>Author</mods:roleTerm>
        </mods:role>
        <mods:namePart>Fu, Zhen</mods:namePart>
        <mods:affiliation>Department of Entomology, Washington State University, Pullman, WA. &amp; Department of Entomology, Texas A &amp; M University, College Station, TX.</mods:affiliation>
        <mods:nameIdentifier type="email">zhen.fu@tamu.edu</mods:nameIdentifier>
    </mods:name>
    <mods:name type="personal">
        <mods:role>
            <mods:roleTerm>Author</mods:roleTerm>
        </mods:role>
        <mods:namePart>Li, Yuxiang</mods:namePart>
        <mods:affiliation>Department of Plant Pathology, Washington State University, Pullman, WA.</mods:affiliation>
    </mods:name>
    <mods:name type="personal">
        <mods:role>
            <mods:roleTerm>Author</mods:roleTerm>
        </mods:role>
        <mods:namePart>Elling, Axel A.</mods:namePart>
        <mods:affiliation>Department of Plant Pathology, Washington State University, Pullman, WA. &amp; Bayer Crop Science, Cary, NC.</mods:affiliation>
    </mods:name>
    <mods:name type="personal">
        <mods:role>
            <mods:roleTerm>Author</mods:roleTerm>
        </mods:role>
        <mods:namePart>Snyder, William E.</mods:namePart>
        <mods:affiliation>Department of Entomology, Washington State University, Pullman, WA. &amp; Department of Entomology, University of Georgia, Athens, GA.</mods:affiliation>
    </mods:name>
    <mods:typeOfResource>text</mods:typeOfResource>
    <mods:relatedItem type="host">
        <mods:titleInfo>
            <mods:title>Journal of Nematology</mods:title>
        </mods:titleInfo>
        <mods:part>
            <mods:date>2020</mods:date>
            <mods:detail type="pubDate">
                <mods:number>2020-03-17</mods:number>
            </mods:detail>
            <mods:detail type="volume">
                <mods:number>52</mods:number>
            </mods:detail>
            <mods:detail type="issue">
                <mods:number>1</mods:number>
            </mods:detail>
            <mods:extent unit="page">
                <mods:start>1</mods:start>
                <mods:end>7</mods:end>
            </mods:extent>
        </mods:part>
    </mods:relatedItem>
    <mods:location>
        <mods:url>http://dx.doi.org/10.21307/jofnem-2020-003</mods:url>
    </mods:location>
    <mods:classification>journal article</mods:classification>
    <mods:identifier type="DOI">10.21307/jofnem-2020-003</mods:identifier>
    <mods:identifier type="ISSN">2640-396X</mods:identifier>
    <mods:identifier type="Zenodo-Dep">11644561</mods:identifier>
</mods:mods>
<table id="DF2423DFFFC41E64FF14FF0FB84B41FF"><caption box="[166,1406,195,225]" pageId="3" pageNumber="4" startId="3.[166,248,195,225]" targetType="table">Table 1. Summary of the genome assembly of strain NW in comparison to strain SN.</caption><thead><tr id="356B7115FFC4E198FF03FEF6B874404B"><th id="76BA1869FFC4E198FF03FEF6BCE4404B"/><th box="[698,930,314,341]" id="76BA1869FFC4E198FD08FEF6BE97404B" pageId="3" pageNumber="4">Strain NW</th><th box="[1113,1345,314,341]" id="76BA1869FFC4E198FBEBFEF6B874404B" pageId="3" pageNumber="4"><emphasis bold="true" box="[1165,1292,314,341]" id="B92FAF45FFC41E64FB3FFEF6B839404B" pageId="3" pageNumber="4">Strain SN</emphasis></th></tr><tr id="356B7115FFC4E198FF03FE40B87440BA"><th box="[177,1345,396,420]" colspan="3" id="76BA1869FFC4E198FF03FE40B87440BA" pageId="3" pageNumber="4"><emphasis box="[177,283,396,420]" id="B92FAF45FFC41E64FF03FE40BC2E40BA" italics="true" pageId="3" pageNumber="4">Assembly</emphasis></th></tr></thead><tbody><tr id="356B7115FFC4E198FF03FE7FB87440D5"><th box="[177,465,435,459]" id="76BA1869FFC4E198FF03FE7FBCE440D5" pageId="3" pageNumber="4">Total bases (bp)</th><td box="[698,930,435,459]" id="76BA1869FFC4E198FD08FE7FBE9740D5" pageId="3" pageNumber="4">121,603,260</td><td box="[1113,1345,435,459]" id="76BA1869FFC4E198FBEBFE7FB87440D5" pageId="3" pageNumber="4">82,627,153</td></tr><tr id="356B7115FFC4E198FF03FE17B87440ED"><th box="[177,465,475,499]" id="76BA1869FFC4E198FF03FE17BCE440ED" pageId="3" pageNumber="4">No. of scaffolds</th><td box="[698,930,475,499]" id="76BA1869FFC4E198FD08FE17BE9740ED" pageId="3" pageNumber="4">na</td><td box="[1113,1345,475,499]" id="76BA1869FFC4E198FBEBFE17B87440ED" pageId="3" pageNumber="4">5,839</td></tr><tr id="356B7115FFC4E198FF03FDCEB8744304"><th box="[177,465,514,538]" id="76BA1869FFC4E198FF03FDCEBCE44304" pageId="3" pageNumber="4">Scaffold N50</th><td box="[698,930,514,538]" id="76BA1869FFC4E198FD08FDCEBE974304" pageId="3" pageNumber="4">na</td><td box="[1113,1345,514,538]" id="76BA1869FFC4E198FBEBFDCEB8744304" pageId="3" pageNumber="4">47,851</td></tr><tr id="356B7115FFC4E198FF03FDE5B874435F"><th box="[177,465,553,577]" id="76BA1869FFC4E198FF03FDE5BCE4435F" pageId="3" pageNumber="4">No. of contigs</th><td box="[698,930,553,577]" id="76BA1869FFC4E198FD08FDE5BE97435F" pageId="3" pageNumber="4">4,678</td><td box="[1113,1345,553,577]" id="76BA1869FFC4E198FBEBFDE5B874435F" pageId="3" pageNumber="4">59,024</td></tr><tr id="356B7115FFC4E198FF03FD9DB8744377"><th box="[177,465,593,617]" id="76BA1869FFC4E198FF03FD9DBCE44377" pageId="3" pageNumber="4">Contig N50</th><td box="[698,930,593,617]" id="76BA1869FFC4E198FD08FD9DBE974377" pageId="3" pageNumber="4">60,433</td><td box="[1113,1345,593,617]" id="76BA1869FFC4E198FBEBFD9DB8744377" pageId="3" pageNumber="4">3,650</td></tr><tr id="356B7115FFC4E198FF03FDB4B874438E"><th box="[177,465,632,656]" id="76BA1869FFC4E198FF03FDB4BCE4438E" pageId="3" pageNumber="4">No. of gaps (bp)</th><td box="[698,930,632,656]" id="76BA1869FFC4E198FD08FDB4BE97438E" pageId="3" pageNumber="4">0</td><td box="[1113,1345,632,656]" id="76BA1869FFC4E198FBEBFDB4B874438E" pageId="3" pageNumber="4">2,769,616</td></tr><tr id="356B7115FFC4E198FF03FD6CB87443A6"><th box="[177,465,672,696]" id="76BA1869FFC4E198FF03FD6CBCE443A6" pageId="3" pageNumber="4">Longest scaffolds (bp)</th><td box="[698,930,672,696]" id="76BA1869FFC4E198FD08FD6CBE9743A6" pageId="3" pageNumber="4">1,315,981</td><td box="[1113,1345,672,696]" id="76BA1869FFC4E198FBEBFD6CB87443A6" pageId="3" pageNumber="4">1,446,875</td></tr><tr id="356B7115FFC4E198FF03FD0BB87443C1"><th box="[177,465,711,735]" id="76BA1869FFC4E198FF03FD0BBCE443C1" pageId="3" pageNumber="4">No. of predicted genes</th><td box="[698,930,711,735]" id="76BA1869FFC4E198FD08FD0BBE9743C1" pageId="3" pageNumber="4"><geoCoordinate box="[775,852,711,735]" degrees="32,304" direction="north" id="EE6F1590FFC41E64FCB5FD0BBE6143C1" orientation="latitude" pageId="3" pageNumber="4" precision="55" value="32.304">32,304</geoCoordinate></td><td box="[1113,1345,711,735]" id="76BA1869FFC4E198FBEBFD0BB87443C1" pageId="3" pageNumber="4"><geoCoordinate box="[1190,1267,711,735]" degrees="36,434" direction="east" id="EE6F1590FFC41E64FB14FD0BB9C643C1" orientation="longitude" pageId="3" pageNumber="4" precision="55" value="36.434">36,434</geoCoordinate></td></tr><tr id="356B7115FFC4E198FF03FD23B8744219"><th box="[177,465,751,775]" id="76BA1869FFC4E198FF03FD23BCE44219" pageId="3" pageNumber="4">Total no. of amino acids</th><td box="[698,930,751,775]" id="76BA1869FFC4E198FD08FD23BE974219" pageId="3" pageNumber="4">12,632,601</td><td box="[1113,1345,751,775]" id="76BA1869FFC4E198FBEBFD23B8744219" pageId="3" pageNumber="4">12,195,137</td></tr><tr id="356B7115FFC4E198FF03FCDAB8744230"><th box="[177,1345,790,814]" colspan="3" id="76BA1869FFC4E198FF03FCDAB8744230" pageId="3" pageNumber="4"><emphasis box="[177,401,790,814]" id="B92FAF45FFC41E64FF03FCDABCA44230" italics="true" pageId="3" pageNumber="4">BUSCO assessment</emphasis></th></tr><tr id="356B7115FFC4E198FF03FCF1B874424B"><th box="[177,465,829,853]" id="76BA1869FFC4E198FF03FCF1BCE4424B" pageId="3" pageNumber="4">Complete BUSCOs</th><td box="[698,930,829,853]" id="76BA1869FFC4E198FD08FCF1BE97424B" pageId="3" pageNumber="4">87.27%</td><td box="[1113,1345,829,853]" id="76BA1869FFC4E198FBEBFCF1B874424B" pageId="3" pageNumber="4">84.32%</td></tr><tr id="356B7115FFC4E198FF03FCA9B8744263"><th box="[177,465,869,893]" id="76BA1869FFC4E198FF03FCA9BCE44263" pageId="3" pageNumber="4">Complete single copy</th><td box="[698,930,869,893]" id="76BA1869FFC4E198FD08FCA9BE974263" pageId="3" pageNumber="4">76.68%</td><td box="[1113,1345,869,893]" id="76BA1869FFC4E198FBEBFCA9B8744263" pageId="3" pageNumber="4">80.55%</td></tr><tr id="356B7115FFC4E198FF03FC40B87442BA"><th box="[177,465,908,932]" id="76BA1869FFC4E198FF03FC40BCE442BA" pageId="3" pageNumber="4">Complete duplicated copy</th><td box="[698,930,908,932]" id="76BA1869FFC4E198FD08FC40BE9742BA" pageId="3" pageNumber="4">10.59%</td><td box="[1113,1345,908,932]" id="76BA1869FFC4E198FBEBFC40B87442BA" pageId="3" pageNumber="4">3.77%</td></tr><tr id="356B7115FFC4E198FF03FC78B87442D2"><th box="[177,465,948,972]" id="76BA1869FFC4E198FF03FC78BCE442D2" pageId="3" pageNumber="4">Fragmented</th><td box="[698,930,948,972]" id="76BA1869FFC4E198FD08FC78BE9742D2" pageId="3" pageNumber="4">7.33%</td><td box="[1113,1345,948,972]" id="76BA1869FFC4E198FBEBFC78B87442D2" pageId="3" pageNumber="4">8.15%</td></tr><tr id="356B7115FFC4E198FF03FC17B87442ED"><th box="[177,465,987,1011]" id="76BA1869FFC4E198FF03FC17BCE442ED" pageId="3" pageNumber="4">Missing</th><td box="[698,930,987,1011]" id="76BA1869FFC4E198FD08FC17BE9742ED" pageId="3" pageNumber="4">5.40%</td><td box="[1113,1345,987,1011]" id="76BA1869FFC4E198FBEBFC17B87442ED" pageId="3" pageNumber="4">7.54%</td></tr><tr id="356B7115FFC4E198FF03FBCFB8744505"><th box="[177,1345,1027,1051]" colspan="3" id="76BA1869FFC4E198FF03FBCFB8744505" pageId="3" pageNumber="4"><emphasis box="[177,285,1027,1051]" id="B92FAF45FFC41E64FF03FBCFBC284505" italics="true" pageId="3" pageNumber="4">Alignment</emphasis></th></tr><tr id="356B7115FFC4E198FF03FBE6B874455C"><th box="[177,465,1066,1090]" id="76BA1869FFC4E198FF03FBE6BCE4455C" pageId="3" pageNumber="4">Aligned Seqs</th><td box="[698,930,1066,1090]" id="76BA1869FFC4E198FD08FBE6BE97455C" pageId="3" pageNumber="4">4,279 (91.47%)</td><td box="[1113,1345,1066,1090]" id="76BA1869FFC4E198FBEBFBE6B874455C" pageId="3" pageNumber="4">5,418 (92.79%)</td></tr><tr id="356B7115FFC4E198FF03FB9DB8744577"><th box="[177,465,1105,1129]" id="76BA1869FFC4E198FF03FB9DBCE44577" pageId="3" pageNumber="4">Aligned Bases</th><td box="[698,930,1105,1129]" id="76BA1869FFC4E198FD08FB9DBE974577" pageId="3" pageNumber="4">92,999,444 (76.48%)</td><td box="[1113,1345,1105,1129]" id="76BA1869FFC4E198FBEBFB9DB8744577" pageId="3" pageNumber="4">74,444,081 (90.10%)</td></tr><tr id="356B7115FFC4E198FF03FBB5B874458F"><th box="[177,465,1145,1169]" id="76BA1869FFC4E198FF03FBB5BCE4458F" pageId="3" pageNumber="4">1-to-1</th><td box="[698,930,1145,1169]" id="76BA1869FFC4E198FD08FBB5BE97458F" pageId="3" pageNumber="4"><geoCoordinate box="[775,852,1145,1169]" degrees="49,949" direction="north" id="EE6F1590FFC41E64FCB5FBB5BE61458F" orientation="latitude" pageId="3" pageNumber="4" precision="55" value="49.949">49,949</geoCoordinate></td><td box="[1113,1345,1145,1169]" id="76BA1869FFC4E198FBEBFBB5B874458F" pageId="3" pageNumber="4"><geoCoordinate box="[1190,1267,1145,1169]" degrees="49,949" direction="east" id="EE6F1590FFC41E64FB14FBB5B9C6458F" orientation="longitude" pageId="3" pageNumber="4" precision="55" value="49.949">49,949</geoCoordinate></td></tr><tr id="356B7115FFC4E198FF03FB6CB87445A6"><th box="[177,465,1184,1208]" id="76BA1869FFC4E198FF03FB6CBCE445A6" pageId="3" pageNumber="4">Total length (1-to-1)</th><td box="[698,930,1184,1208]" id="76BA1869FFC4E198FD08FB6CBE9745A6" pageId="3" pageNumber="4">72,468,269</td><td box="[1113,1345,1184,1208]" id="76BA1869FFC4E198FBEBFB6CB87445A6" pageId="3" pageNumber="4">72,538,432</td></tr><tr id="356B7115FFC4E198FF03FB04B87445FE"><th box="[177,465,1224,1248]" id="76BA1869FFC4E198FF03FB04BCE445FE" pageId="3" pageNumber="4">Avg. identity (1-to-1)</th><td box="[698,930,1224,1248]" id="76BA1869FFC4E198FD08FB04BE9745FE" pageId="3" pageNumber="4">97.07</td><td box="[1113,1345,1224,1248]" id="76BA1869FFC4E198FBEBFB04B87445FE" pageId="3" pageNumber="4">97.07</td></tr><tr id="356B7115FFC4E198FF03FB23B8744419"><th box="[177,465,1263,1287]" id="76BA1869FFC4E198FF03FB23BCE44419" pageId="3" pageNumber="4">M-to-M</th><td box="[698,930,1263,1287]" id="76BA1869FFC4E198FD08FB23BE974419" pageId="3" pageNumber="4">133,667</td><td box="[1113,1345,1263,1287]" id="76BA1869FFC4E198FBEBFB23B8744419" pageId="3" pageNumber="4">133,667</td></tr><tr id="356B7115FFC4E198FF03FADAB8744430"><th box="[177,465,1302,1326]" id="76BA1869FFC4E198FF03FADABCE44430" pageId="3" pageNumber="4">Total length (M-to-M)</th><td box="[698,930,1302,1326]" id="76BA1869FFC4E198FD08FADABE974430" pageId="3" pageNumber="4">106,859,791</td><td box="[1113,1345,1302,1326]" id="76BA1869FFC4E198FBEBFADAB8744430" pageId="3" pageNumber="4">106,997,101</td></tr><tr id="356B7115FFC4E198FF03FAF2B8744448"><th box="[177,465,1342,1366]" id="76BA1869FFC4E198FF03FAF2BCE44448" pageId="3" pageNumber="4">Avg. identity (M-to-M)</th><td box="[698,930,1342,1366]" id="76BA1869FFC4E198FD08FAF2BE974448" pageId="3" pageNumber="4">95.69</td><td box="[1113,1345,1342,1366]" id="76BA1869FFC4E198FBEBFAF2B8744448" pageId="3" pageNumber="4">95.69</td></tr><tr id="356B7115FFC4E198FF03FAA9B8744463"><th box="[177,1345,1381,1405]" colspan="3" id="76BA1869FFC4E198FF03FAA9B8744463" pageId="3" pageNumber="4"><emphasis box="[177,374,1381,1405]" id="B92FAF45FFC41E64FF03FAA9BC434463" italics="true" pageId="3" pageNumber="4">GenOmiC variatiOn</emphasis></th></tr><tr id="356B7115FFC4E198FF03FA41B87444BB"><th box="[177,465,1421,1445]" id="76BA1869FFC4E198FF03FA41BCE444BB" pageId="3" pageNumber="4">Breakpoints</th><td box="[698,930,1421,1445]" id="76BA1869FFC4E198FD08FA41BE9744BB" pageId="3" pageNumber="4">261,902</td><td box="[1113,1345,1421,1445]" id="76BA1869FFC4E198FBEBFA41B87444BB" pageId="3" pageNumber="4">252,282</td></tr><tr id="356B7115FFC4E198FF03FA78B87444D2"><th box="[177,465,1460,1484]" id="76BA1869FFC4E198FF03FA78BCE444D2" pageId="3" pageNumber="4">Relocations</th><td box="[698,930,1460,1484]" id="76BA1869FFC4E198FD08FA78BE9744D2" pageId="3" pageNumber="4"><geoCoordinate box="[782,845,1460,1484]" degrees="8,456" direction="north" id="EE6F1590FFC41E64FCBCFA78BE7844D2" orientation="latitude" pageId="3" pageNumber="4" precision="55" value="8.456">8,456</geoCoordinate></td><td box="[1113,1345,1460,1484]" id="76BA1869FFC4E198FBEBFA78B87444D2" pageId="3" pageNumber="4"><geoCoordinate box="[1197,1260,1460,1484]" degrees="5,231" direction="east" id="EE6F1590FFC41E64FB1FFA78B9D944D2" orientation="longitude" pageId="3" pageNumber="4" precision="55" value="5.231">5,231</geoCoordinate></td></tr><tr id="356B7115FFC4E198FF03FA10B87444EA"><th box="[177,465,1500,1524]" id="76BA1869FFC4E198FF03FA10BCE444EA" pageId="3" pageNumber="4">Translocations</th><td box="[698,930,1500,1524]" id="76BA1869FFC4E198FD08FA10BE9744EA" pageId="3" pageNumber="4"><geoCoordinate box="[775,852,1500,1524]" degrees="13,595" direction="north" id="EE6F1590FFC41E64FCB5FA10BE6144EA" orientation="latitude" pageId="3" pageNumber="4" precision="55" value="13.595">13,595</geoCoordinate></td><td box="[1113,1345,1500,1524]" id="76BA1869FFC4E198FBEBFA10B87444EA" pageId="3" pageNumber="4"><geoCoordinate box="[1190,1267,1500,1524]" degrees="16,494" direction="east" id="EE6F1590FFC41E64FB14FA10B9C644EA" orientation="longitude" pageId="3" pageNumber="4" precision="55" value="16.494">16,494</geoCoordinate></td></tr><tr id="356B7115FFC4E198FF03F9CFB8744705"><th box="[177,465,1539,1563]" id="76BA1869FFC4E198FF03F9CFBCE44705" pageId="3" pageNumber="4">Inversions</th><td box="[698,930,1539,1563]" id="76BA1869FFC4E198FD08F9CFBE974705" pageId="3" pageNumber="4"><geoCoordinate box="[782,845,1539,1563]" degrees="1,411" direction="north" id="EE6F1590FFC41E64FCBCF9CFBE784705" orientation="latitude" pageId="3" pageNumber="4" precision="55" value="1.411">1,411</geoCoordinate></td><td box="[1113,1345,1539,1563]" id="76BA1869FFC4E198FBEBF9CFB8744705" pageId="3" pageNumber="4"><geoCoordinate box="[1197,1260,1539,1563]" degrees="1,952" direction="east" id="EE6F1590FFC41E64FB1FF9CFB9D94705" orientation="longitude" pageId="3" pageNumber="4" precision="55" value="1.952">1,952</geoCoordinate></td></tr><tr id="356B7115FFC4E198FF03F9E6B874475C"><th box="[177,465,1578,1602]" id="76BA1869FFC4E198FF03F9E6BCE4475C" pageId="3" pageNumber="4">Insertions</th><td box="[698,930,1578,1602]" id="76BA1869FFC4E198FD08F9E6BE97475C" pageId="3" pageNumber="4">105,325</td><td box="[1113,1345,1578,1602]" id="76BA1869FFC4E198FBEBF9E6B874475C" pageId="3" pageNumber="4">74,670</td></tr><tr id="356B7115FFC4E198FF03F99EB8744774"><th box="[177,465,1618,1642]" id="76BA1869FFC4E198FF03F99EBCE44774" pageId="3" pageNumber="4">Total SNPs</th><td box="[698,930,1618,1642]" id="76BA1869FFC4E198FD08F99EBE974774" pageId="3" pageNumber="4">907,706</td><td box="[1113,1345,1618,1642]" id="76BA1869FFC4E198FBEBF99EB8744774" pageId="3" pageNumber="4">907,706</td></tr></tbody></table></document>