| MEGACHIROPTERA Pteropidae | PTEROPODIFORMI Pteropodidae Eidolinae |
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| Eidolon helvum (Kerr, 1792) | Eidolon helvum (Kerr, 1792) |
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| Rousettinae Epomophorini |
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| Epomophorus anselli Bergmans & Van Strien, 2004 |
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| Epomophorus crypturus Peters, 1852 Epomophorus gambianus (Ogilby, 1835) | Epomophorus crypturus Peters, 1852 |
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| Epomophorus anurus Heuglin, 1864 Epomophorus labiatus minor (Dobson, 1880) | Epomophorus labiatus (Temminck, 1837) |
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| Epomophorus minimus Claessen & De Vree, 1991 |
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| Epomophorus labiatus minor (Dobson, 1880) | Epomophorus minor Dobson, 1880 |
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| Epomophorus wahlbergi haldemani (Halowell, 1846) | Epomophorus wahlbergi (Sundevall, 1846) |
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| Epomops dobsoni (Bocage, 1889) | Epomops dobsonii (Bocage, 1889) |
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| Epomops franqueti franqueti (Tomes, 1860) | Epomops franqueti (Tomes, 1860) |
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| Hypsignathus monstrosus H. Allen, 1861 | Hypsignathus monstrosus H. Allen, 1862 |
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| Micropteropus intermedius Hayman, 1963 | Micropteropus intermedius Hayman, 1963 |
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| Micropteropus pusillus (Peters, 1867) | Micropteropus pusillus (Peters, 1868) |
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| Nanonycteris veldkampii (Jentink, 1888) |
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| Myonycterini |
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| Megaloglossus woermanni Pagenstecher, 1885 Megaloglossus woermanni prigoginei Hayman, 1966 | Megaloglossus woermanni Pagenstecher, 1885 |
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| Rousettus (Lissonycteris) angolensis (Bocage, 1898) | Myonycteris angolensis (Bocage, 1898) |
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| Myonycteris relicta Bergmans, 1980 |
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| Myonycteris wroughtoni Andersen, 1908 | Myonycteris torquata (Dobson, 1878) |
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| Plerotini |
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| Plerotes anchietae (Seabra, 1900) | Plerotes anchietae (Seabra, 1900) |
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| Rousettini |
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| Rousettus aegyptiacus leachi (Smith, 1823) | Rousettus aegyptiacus (E. Geoffroy St.-Hilaire, 1810) |
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| Scotonycterini |
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| Casinycteris argynnis Thomas, 1910 | Casinycteris argynnis Thomas, 1910 |
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| Scotonycteris zenkeri Matschie, 1894 | Scotonycteris bergmansi Hassanin et al., 2015 |
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| Stenonycterini |
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| Rousettus (Stenonycteris) lanosus Thomas, 1906 | Stenonycteris lanosus Thomas, 1906 |
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| MICROCHIROPTERA Hipposideridae | Hipposideridae |
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| Asellia tridens (E. Geoffroy St.-Hilaire, 1813) |
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| Hipposideros cyclops (Temminck, 1853) | Doryrhina cyclops (Temminck, 1853) |
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