The long-eared freshwater planarians of Madagascar form a separate phylogenetic clade within the genus Dugesia (Platyhelminthes: Tricladida), with the description of two new species
Author
Stocchino, Giacinta Angela
Dipartimento di Medicina Veterinaria, Università di Sassari, Via Vienna 2, 07100, Sassari, Italy
giacistocchino@gmail.com
Author
Sluys, Ronald
Naturalis Biodiversity Center, P. O. Box 9517, 2300 RA Leiden, The Netherlands
Author
Solà, Eduard
Departament de Genètica, Microbiologia i Estadística and Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Barcelona, & Present address: Institut de Biologia Evolutiva, (CSIC- Universitat Pompeu Fabra), Barcelona, Catalonia, Spain
Author
Riutort, Marta
Departament de Genètica, Microbiologia i Estadística and Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Barcelona,
Author
Manconi, Renata
Dipartimento di Medicina Veterinaria, Università di Sassari, Via Vienna 2, 07100, Sassari, Italy
text
Zoological Journal of the Linnean Society
2024
zlae 143
2024-12-07
202
4
1
29
https://doi.org/10.1093/zoolinnean/zlae143
journal article
307986
10.1093/zoolinnean/zlae143
d4b81450-56e8-4d02-9b0f-5e7ba5316db5
0024-4082
14811333
74A0FAB-9EC4-459B-96D7-EC569FDC6C1F
Table 2. Specimens/species used in the phylogenetic analysis, with their abbreviated names or codes, and GenBank accession numbers for the various genes/sequences (COI, ITS1, 18S, 28S, DUNUC3). Dashes (–): unavailable sequences. Because DUNUC3 was not used in the present study, only newly obtained DUNUC3 are provided, for the others consult Solà et al. (2022).| Species | Code | COI | ITS1 | 18S | 28S | DUNUC3 |
|---|
| Dugesia aenigma | Daen | KC006968 | KC007040 | KF308698 | – | |
|---|
| D. aethiopica | Daet | KY498845 | KY498785 | KY498822 | KY498806 | |
|---|
| D. afromontana | Dafr | KY498846 | KY498786 | KY498823 | KY498807 | |
|---|
| D. arabica | Dara | OL410620 | OK587374 | OK646637 | OK491342 | |
|---|
| D. arcadia | Darc | KC006971 | KC007044 | KF308694 | OK491318 | |
|---|
| D. ariadnae | Dari | JN376142 | KC007048 | OK646636 | OK491317 | |
|---|
| D. aurea | Daur | MK712631 | MK713027 | OM281823 | MK712522 | |
|---|
| D. batuensis | Dbat | OL410626 | OK587362 | OK646630 | OK491316 | |
|---|
| D. benazzii | Dben | FJ646977 + FJ646933 | FJ646890 | OK646628 | MK712509 | |
|---|
| D. bifida | Dbif | – | KY498804 | KY498843 | KY498820 | |
|---|
| D. bijuga | Dbij | MH119630 | – | MH113806 | – | |
|---|
| D. circumcisa | Dcir | MZ147041 | MZ146782 | – | – | |
|---|
| D. constrictiva | Dcon | MZ871766 | MZ869023 | – | – | |
|---|
| D. corbata | Dcor | MK712635 | MK713029 | OM281825 | MK712524 | |
|---|
| D. cretica | Dcre | KC006976 | KC007050 | OK646622 | OK491340 | |
|---|
| D. damoae | Ddam | KC006979 | KC007057 | OK646619 | OK491310 | |
|---|
| D. deharvengi | Ddeh | KF907820 | KF907817 | – | KF907824 | |
|---|
| D. effusa | Deff | KC006983 | KC007058 | OK646618 | OK491311 | |
|---|
| D. elegans | Dele | KC006985 | KC007062 | KF308695 | OK491313 | |
|---|
| D. etrusca | Detr | FJ646984+ FJ646939 | FJ646898 | OK646617 | OK491312 | |
|---|
| D. gemmulata | Dgem | OL632203 | – | – | – | |
|---|
| D. gibberosa | Dgib | KY498857 | KY498803 | KY498842 | KY498819 | |
|---|
| D. granosa | Dgra | OL410634 | KY498795 | KY498833 | KY498816 | |
|---|
| D. hepta | Dhep | FJ646988 + FJ646943 | FJ646902 | OK646612 | OK491309 | |
|---|
| D. ilvana | Dilv | FJ646989+ FJ646944 | FJ646903 | OK646608 | OK491334 | |
|---|
| D. improvisa | Dimp | KC006987 | KC007065 | KF308696 | OK491304 | |
|---|
| D. insolita | Dmad5 | OL410650 | OK587346 | OK646591 | OK491300 | |
|---|
| D. insolita | Dmad6 | OL410651 | OK587348 | OK646590 | OK491298 | |
|---|
| D. liguriensis | Dlig | FJ646992 | FJ646907 | OK646615 | OK491353 | |
|---|
| D. majuscula | Dmaj | MW533425 | MW533591 | – | – | |
|---|
| D. malickyi | Dmal | KC006988 | KC007068 | OK646585 | OK491294 | |
|---|
| D. naiadis | Dnai | KF308756 | OK587343 | OK646581 | OK491293 | |
|---|
| D. notogaea | Dnot | FJ646993 + FJ646945 | FJ646908 | KJ599713 | KJ599720 | |
|---|
| D. parasagitta | Dpar | KC006993 | KC007073 | OK646577 | – | |
|---|
| D. pustulata | Dpus | MH119631 | – | MH113807 | OK491355 | |
|---|
| D. ryukyuensis | Dryu | OL410662 | OK587379 | OK646571 | OK491322 | |
|---|
| D. sagitta | Dsag | KC007006 | KC007077 | OK646567 | OK491320 | |
|---|
| D. semiglobosa | Dsem | MW525210 | MW526992 | – | – | |
|---|
| D. sicula | Dsic | KF308797 | OK587339 | OK646563 | OK491287 | |
|---|
| D. sigmoides | Dsig | KY498849 | KY498789 | KY498827 | KY498811 | |
|---|
| D. sinensis | Dsin | KP401592 | – | – | – | |
|---|
| D. subtentaculata | Dsub | MK712606 | MK713031 | OK646583 | – | |
|---|
| D. tubqalis | Dtub | OM281843 | OK587337 | OK646555 | OK491285 | |
|---|
| D. umbonata | Dumb | MT176641 | MT177211 | MT177214 | MT177210 | |
|---|
| D. verrucula | Dver | MZ147040 | MZ146760 | – | – | |
|---|
| D. vilafarrei | Dvil | MK712648 | MK713017 | OM281821 | MK712511 | |
|---|
| Dugesia sp. | GS15 | – | PQ514062 | PQ514065 | PQ514068 | |
|---|
| Dugesia sp. | GS21 | PQ512205 | PQ514063 | PQ514066 | PQ514069 | PQ515807 |
|---|
| Dugesia sp. | GS34-Dmad4 | OL410649 | OK587345 | OK646592 | OK491302 | |
|---|
| Dugesia sp. | GS35 | – | PQ514064 | PQ514067 | PQ514070 | PQ515806 |
|---|
| Dugesia sp. | GS46C-Dmad10 | OL410653 | OK587349 | OK646588 | OK491296 | |
|---|
| Dugesia sp. | GS74B-Dmad18 | OL410655 | OK587335 | OK646586 | OK491283 | |
|---|
| Dugesia sp. | GS74A1-Dmad7 | OL410652 | OK587347 | OK646589 | OK491299 | |
|---|
| Dugesia sp. | GS75-Dmad15 | OL410654 | OK587342 | OK646587 | OK491282 | |
|---|
| Outgroup: | | | | | | |
|---|
| Schmidtea mediterranea | Smed | JF837062 | – | U31085 | MG457267 | |
|---|
| S. nova | Snov | MG457277 | – | – | MG457270 | |
|---|
| S. lugubris | Slug | MG457276 | – | – | MG457268 | |
|---|
| S. polychroa | Spol | AF287123 | – | AF013154 | DQ665993 | |
|---|
| Recurva postrema | Spos | KF308763 | – | KF308691 | MG457274 | |
|---|